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International Journal of Phytomedicine and Phytotherapy

Table 1 Single and multiple ligand docking analysis

From: In silico and in vitro analysis reveal multi-target anti-hyperglycaemic properties of gedunin, a limonoid from neem (Azadirachta indica)

No.

Complex

H-bond amino acids

Free Energy Of Binding

(kcal/mol)

Ki

(μM)

1.

HPA + amylose

Gln63, His201, Arg195, Asp197,

His299, His305, Ile235

−5.31

23.55

2.

HPA + acarbose

His101, Arg195, His201, Val234, Ile235, His299, His305, Ala307

−5.38

113.73

3.

HPA + gedunin

Gln63, His101, His201

−7.66

2.42

4.

HPA + amylose+acarbose

Gln63, Ala106, Thr163, Arg195, Lys200, His201, His299, His305

−5.40

110.8

5.

HPA + amylose+gedunin

Gln63, His101, His201

−8.12

1.12

6.

HSA + amylose

Gln63, Tyr151, Arg195, Lys200, His201

−5.89

47.98

7.

HSA + acarbose

Trp59, Gln63, Gly104, Ala106, Ser163, His201, His299, His305

−5.68

68.84

8.

HSA + gedunin

Gln63, His101, His201

−6.36

21.91

9.

HSA + amylose+acarbose

Trp58, Trp59, Tyr151, Arg195, Lys200, His201, Leu237, Gly306, Lys352

−5.90

47.19

10

HSA + amylose+gedunin

Glu63, His101, Arg195

−7.29

4.51